------- SECIS element -- id:1 -- grade:A ---- Chromosome = CM007945.1:subseq_61785027,129308_ Strand = + Positions = 82030 - 82101 Found by: Infernal (score=36.73) Covels (score=37.3) Stem2 length = 8 Apical loop length = 18 Insertion in stem2 = 1, 0 Free Energy = -23.57 ..(((((((.......((((((((((((.(((................)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggc-ccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc (((((((((---....{[[{((({(((-.((..................))-)))})))}]]}..--..-.))))))))) target GGUCGCCAG---CUAAUGAUGACUUGC-ACUAAAACCCACAACUGGGGAGG-GCAUGUCUGAUGA--CA-CCUGGCGACC **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = CM007945.1:subseq_61785027,129308_ Strand = - Positions = 92309 - 92229 Found by: Infernal (score=11.87) Covels (score=13.24) Stem2 length = 8 Apical loop length = 17 Insertion in stem2 = 1, 0 Free Energy = -5.46 ..(((((((........((((((((((((.(((...............)))))))))))))))..........))))))).. model uucggucaugcg-UuaAUGAcGgccuggc-ccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc .({((((((........([[(((({({((.((.................))))})}))))]])......-...))))))}). target AGGAGGUUAUUGAUGAAUGAAGAUAGUGCAAUCAAAUUAUUCUUUGAAAAUGUUCAAUCUGAGACCUGG-AUUUGACUUGCG **** ^^^ ****